Module Hydrodynamics.
Only contain function, state independent. More...

Collaboration diagram for mod_hydrodynamics:

Public Member Functions
subroutine	scale_diffusion_coefficients (tab_protein, geom, cutoff_phi)
	Wrapper function.

subroutine	scale_diffusion_coefficients_sdamm (tab_protein, geom, cutoff_phi)

subroutine	scale_diffusion_coefficients_sda2prot (tab_protein, geom, cutoff_phi)

subroutine	local_volume_fraction (prot2, dist2, cutoff_phi, vol_occ)
	compute volume fraction More...

subroutine	local_trans_diff_scaling (dm_init, vol_occ, dm_scaled)
	Scale the translation diffusion coefficient according to.

subroutine	local_rot_diff_scaling (dr_init, vol_occ, dr_scaled)
	Scale the rotational diffusion coefficient according to.

Detailed Description

Module Hydrodynamics.
Only contain function, state independent.

Member Function/Subroutine Documentation

subroutine mod_hydrodynamics::local_volume_fraction	(	type ( protein )	prot2,
		real ( kind=8 )	dist2,
		real ( kind=8 )	cutoff_phi,
		real ( kind=8 )	vol_occ
	)

compute volume fraction

Parameters

prot2	: second solute
dist2	: distance square
cutoff_phi	: cutoff distance
vol_occ	: return fraction of occupied volume

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The documentation for this module was generated from the following file: